Basic Information
Locus ID:
gene:TRIDC5BG055590
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Bulb-type mannose-specific lectin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 539485133 | 539504511 | - | gene:TRIDC5BG055590 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.15 | 146,211.70 Da | 38.42 | 83.76 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 526 | 791 | 3.85029E-87 | - |
| CDD | cd01098 | PAN_AP_plant | 345 | 440 | 2.11496E-12 | - |
| CDD | cd00028 | B_lectin | 32 | 155 | 3.92779E-26 | IPR001480 |
| CDD | cd00028 | B_lectin | 876 | 1000 | 5.50699E-25 | IPR001480 |
| CDD | cd01098 | PAN_AP_plant | 1198 | 1283 | 1.79326E-17 | - |
| Pfam | PF08276 | PAN-like domain | 359 | 423 | 3.2E-10 | IPR003609 |
| Pfam | PF08276 | PAN-like domain | 1198 | 1266 | 2.5E-15 | IPR003609 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 524 | 786 | 1.3E-45 | IPR001245 |
| Pfam | PF01453 | D-mannose binding lectin | 919 | 1027 | 9.1E-30 | IPR001480 |
| Pfam | PF00954 | S-locus glycoprotein domain | 1060 | 1174 | 4.2E-19 | IPR000858 |
| Pfam | PF00954 | S-locus glycoprotein domain | 216 | 331 | 9.8E-20 | IPR000858 |
| Pfam | PF01453 | D-mannose binding lectin | 74 | 183 | 7.6E-27 | IPR001480 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 504 | 789 | 2.16E-78 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 906 | 1064 | 2.36E-25 | IPR036426 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 75 | 188 | 7.2E-21 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 595 | 802 | 3.6E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 492 | 594 | 1.2E-34 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 864 | 998 | 5.4E-19 | IPR036426 |
| Gene3D | G3DSA:2.90.10.10 | - | 20 | 154 | 2.9E-19 | IPR036426 |
| SMART | SM00473 | ntp_6 | 1196 | 1282 | 0.014 | IPR003609 |
| SMART | SM00108 | blect_4 | 874 | 1000 | 3.6E-32 | IPR001480 |
| SMART | SM00473 | ntp_6 | 353 | 439 | 0.11 | IPR003609 |
| SMART | SM00220 | serkin_6 | 520 | 787 | 5.8E-29 | IPR000719 |
| SMART | SM00108 | blect_4 | 30 | 156 | 1.3E-26 | IPR001480 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 520 | 796 | 36.979504 | IPR000719 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 354 | 440 | 8.943619 | IPR003609 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 1197 | 1282 | 9.509388 | IPR003609 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 868 | 998 | 18.501949 | IPR001480 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 24 | 154 | 15.624761 | IPR001480 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 526 | 547 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 640 | 652 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G61610.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_044393644.1 | putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g61610 [Triticum aestivum] | 0 |
| Q9SY89 | Putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g61610 OS=Arabidopsis thaliana OX=3702 GN=At1g61610 PE=3 SV=1 | 0 | |
| TrEMBL | A0A0E0M487 | non-specific serine/threonine protein kinase OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG055590.