Basic Information
Locus ID:
gene:TRIDC5BG055570
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 539454301 | 539457550 | - | gene:TRIDC5BG055570 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.12 | 61,459.30 Da | 40.75 | 74.77 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 182 | 272 | 4.37319E-11 | - |
| Pfam | PF00954 | S-locus glycoprotein domain | 51 | 159 | 1.9E-19 | IPR000858 |
| Pfam | PF00069 | Protein kinase domain | 334 | 498 | 3.9E-33 | IPR000719 |
| Pfam | PF08276 | PAN-like domain | 190 | 254 | 1.8E-15 | IPR003609 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 13 | 58 | 2.7E-5 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 314 | 498 | 2.16E-54 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 405 | 505 | 8.1E-24 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 296 | 404 | 6.1E-37 | - |
| SMART | SM00473 | ntp_6 | 186 | 271 | 3.3E-7 | IPR003609 |
| SMART | SM00220 | serkin_6 | 329 | 560 | 5.2E-11 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 329 | 564 | 27.905476 | IPR000719 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 182 | 271 | 9.418461 | IPR003609 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 450 | 462 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 335 | 357 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 536 | 564 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 534 | 564 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21380.1 | receptor kinase 3. encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels. | 0 |
| RefSeq | XP_037443038.1 | G-type lectin S-receptor-like serine/threonine-protein kinase B120 [Triticum dicoccoides] | 0 |
| O81905 | Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana OX=3702 GN=SD18 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453LJQ2 | Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG055570.