Basic Information
Locus ID:
gene:TRIDC5BG052180
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 516307832 | 516309091 | + | gene:TRIDC5BG052180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.57 | 46,970.12 Da | 40.42 | 85.58 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 15 | 50 | 1.6E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 5 | 69 | 7.72E-14 | IPR036047 |
| SUPERFAMILY | SSF50965 | Galactose oxidase, central domain | 201 | 401 | 2.22E-5 | IPR011043 |
| Gene3D | G3DSA:1.20.1280.50 | - | 9 | 62 | 8.2E-8 | - |
| SMART | SM00256 | fbox_2 | 16 | 56 | 6.8E-5 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 129 | 371 | 2.7E-13 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 10 | 55 | 9.285514 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25460.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_044393543.1 | F-box/kelch-repeat protein At3g23880-like [Triticum aestivum] | 0 |
| TrEMBL | A0A3B6LRE7 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG052180.