Basic Information
Locus ID:
gene:TRIDC5BG050960
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Regulatory subunit of the dimeric E1 enzyme. E1 activates RUB1 NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a RUB1-ECR1 thioester and free AMP. E1 finally transfers RUB1 to the catalytic cysteine of RCE1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 508255330 | 508262781 | - | gene:TRIDC5BG050960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.31 | 58,577.21 Da | 38.47 | 96.22 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01493 | APPBP1_RUB | 15 | 530 | 0.0 | - |
| Pfam | PF00899 | ThiF family | 17 | 518 | 2.0E-25 | IPR000594 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 14 | 530 | 1.96E-138 | IPR035985 |
| Gene3D | G3DSA:3.40.50.720 | - | 374 | 532 | 6.3E-37 | - |
| Gene3D | G3DSA:3.40.50.720 | - | 4 | 373 | 9.1E-66 | - |
| PIRSF | PIRSF039099 | APP-BP1 | 8 | 532 | 2.7E-171 | IPR030667 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G05180.1 | NAD(P)-binding Rossmann-fold superfamily protein. Encodes a subunit of the RUB1 activating enzyme that regulates the protein degradation activity of Skp1-Cullin-Fbox complexes, primarily, but not exclusively, affecting auxin responses. Acts alongside AS1 to exclude BP expression from leaves. | 0 |
| RefSeq | XP_037442800.1 | NEDD8-activating enzyme E1 regulatory subunit AXL-like isoform X2 [Triticum dicoccoides] | 0 |
| P42744 | NEDD8-activating enzyme E1 regulatory subunit AXR1 OS=Arabidopsis thaliana OX=3702 GN=AXR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6KJM7 | NEDD8-activating enzyme E1 regulatory subunit OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG050960.