Basic Information
Locus ID:
gene:TRIDC5BG049750
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 497397236 | 497397784 | + | gene:TRIDC5BG049750 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 18,616.10 Da | 37.73 | 97.58 | 0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 116 | 159 | 3.4282E-18 | - |
| Pfam | PF13639 | Ring finger domain | 116 | 159 | 2.8E-14 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 95 | 164 | 1.44E-22 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 95 | 165 | 7.8E-21 | IPR013083 |
| SMART | SM00184 | ring_2 | 117 | 158 | 4.0E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 117 | 159 | 12.267982 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G49230.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037441675.1 | RING-H2 finger protein ATL74-like [Triticum dicoccoides] | 0 |
| Q6NQG7 | RING-H2 finger protein ATL78 OS=Arabidopsis thaliana OX=3702 GN=ATL78 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6LQI7 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG049750.