halophFGD

Basic Information

Locus ID: gene:TRIDC5BG049730

Species & Taxonomic ID: Triticum dicoccoides & 85692

Genome Assembly: GCF_002162155.2

Description: RING-like zinc finger

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
5B	497371695	497376852	+	gene:TRIDC5BG049730

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.26	18,943.57 Da	48.00	102.49	0.28

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF17123	RING-like zinc finger	131	153	1.1E-6	IPR001841
SUPERFAMILY	SSF57850	RING/U-box	112	152	2.47E-7	-
Gene3D	G3DSA:3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	97	154	1.9E-6	IPR013083

KEGG Pathway

KO Term:

K19040 (E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:2.3.2.27])

Best hit

Source	Best Hit ID	Description
TAIR	AT1G49230.1	RING/U-box superfamily protein.
RefSeq	XP_044392221.1	RING-H2 finger protein ATL74-like [Triticum aestivum]
Swiss-Prot	Q6NQG7	RING-H2 finger protein ATL78 OS=Arabidopsis thaliana OX=3702 GN=ATL78 PE=2 SV=1
TrEMBL	A0A453LCR9	RING-type domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC5BG049730.