Basic Information
Locus ID:
gene:TRIDC5BG048870
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 492228224 | 492230927 | + | gene:TRIDC5BG048870 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.99 | 36,155.53 Da | 32.39 | 76.36 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 138 | 176 | 7.4E-5 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 14 | 322 | 8.66E-33 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 9 | 324 | 8.3E-54 | IPR015943 |
| SMART | SM00320 | WD40_4 | 51 | 91 | 15.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 283 | 322 | 330.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 184 | 224 | 190.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 136 | 176 | 1.0E-8 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 143 | 179 | 9.678328 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 143 | 185 | 11.611251 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 163 | 177 | - | IPR019775 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80710.1 | DROUGHT SENSITIVE 1. Encodes a WD40 repeat family protein containing a DWD (DDB1 binding WD40) motif. Mutant analysis demonstrates that DRS1 promotes tolerance to drought stress, possibly mediated by ABA, and suggests involvement of DDB1 Cul4mediated protein degradation in drought response. | 0 |
| RefSeq | XP_037442667.1 | DNA damage-binding protein cmr1-like [Triticum dicoccoides] | 0 |
| Q4KLQ5 | WD repeat-containing protein 76 OS=Xenopus laevis OX=8355 GN=wdr76 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6LQ69 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG048870.