Basic Information
Locus ID:
gene:TRIDC5BG048480
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
CPK24
Description:
EF hand
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 486389375 | 486393122 | - | gene:TRIDC5BG048480 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.35 | 61,834.53 Da | 50.97 | 79.04 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 461 | 520 | 7.47011E-18 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 76 | 338 | 1.43325E-121 | - |
| Pfam | PF13499 | EF-hand domain pair | 389 | 446 | 1.1E-9 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 459 | 520 | 1.6E-14 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 77 | 339 | 1.5E-66 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 377 | 533 | 8.39E-42 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 74 | 349 | 5.4E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 167 | 348 | 1.8E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 79 | 166 | 1.1E-22 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 349 | 523 | 1.5E-49 | - |
| SMART | SM00054 | efh_1 | 422 | 450 | 0.05 | IPR002048 |
| SMART | SM00054 | efh_1 | 494 | 522 | 5.5E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 386 | 414 | 0.011 | IPR002048 |
| SMART | SM00220 | serkin_6 | 77 | 339 | 9.1E-84 | IPR000719 |
| SMART | SM00054 | efh_1 | 458 | 486 | 0.0012 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 418 | 453 | 9.57592 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 77 | 339 | 45.459904 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 382 | 417 | 14.792358 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 454 | 489 | 13.676544 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 490 | 525 | 13.704439 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 83 | 106 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 431 | 443 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 467 | 479 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 395 | 407 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 503 | 515 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 201 | 213 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_037442637.1 | calcium-dependent protein kinase 22-like [Triticum dicoccoides] | 0 |
| Q69IM9 | Calcium-dependent protein kinase 22 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK22 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B6LQE6 | Calcium-dependent protein kinase 30 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG048480.