Basic Information
Locus ID:
gene:TRIDC5BG048050
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
U-box domain-containing protein 33
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 484198250 | 484206303 | + | gene:TRIDC5BG048050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 95,836.60 Da | 45.54 | 78.37 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 791 | 831 | 1.05741E-21 | - |
| CDD | cd01989 | STK_N | 28 | 180 | 8.33209E-37 | - |
| Pfam | PF00069 | Protein kinase domain | 511 | 766 | 9.0E-46 | IPR000719 |
| Pfam | PF04564 | U-box domain | 788 | 858 | 2.3E-17 | IPR003613 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 488 | 767 | 1.17E-71 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 42 | 169 | 2.09E-7 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 781 | 856 | 6.0E-22 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 495 | 583 | 4.4E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 584 | 779 | 1.0E-51 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 786 | 859 | 4.2E-24 | IPR013083 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 28 | 156 | 1.7E-7 | IPR014729 |
| SMART | SM00220 | serkin_6 | 511 | 778 | 5.1E-36 | IPR000719 |
| SMART | SM00504 | Ubox_2 | 790 | 853 | 4.3E-24 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 511 | 778 | 35.424763 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 786 | 859 | 24.123989 | IPR003613 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 629 | 641 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 309 | 328 | - | - |
| Coils | Coil | Coil | 359 | 390 | - | - |
| Coils | Coil | Coil | 402 | 482 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_037442599.1 | U-box domain-containing protein 33-like isoform X1 [Triticum dicoccoides] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6KLG5 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG048050.