Basic Information
Locus ID:
gene:TRIDC5BG046350
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Prokaryotic RING finger family 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 473561276 | 473561882 | - | gene:TRIDC5BG046350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.14 | 20,877.43 Da | 52.60 | 71.59 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16449 | RING-HC | 153 | 190 | 2.74426E-9 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 152 | 197 | 2.7E-12 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 152 | 197 | 4.24E-13 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 131 | 201 | 5.1E-14 | IPR013083 |
| SMART | SM00184 | ring_2 | 153 | 190 | 1.8E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 153 | 191 | 11.707369 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 168 | 177 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 39 | 63 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 39 | 102 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25030.3 | - | 0 |
| RefSeq | XP_020185241.1 | baculoviral IAP repeat-containing protein 7 [Aegilops tauschii subsp. strangulata] | 0 |
| TrEMBL | A0A3B6LPV8 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG046350.