Basic Information
Locus ID:
gene:TRIDC5BG044920
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Anaphase-promoting complex subunit 4 WD40 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 464508563 | 464510875 | + | gene:TRIDC5BG044920 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.92 | 51,354.97 Da | 49.52 | 72.58 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 168 | 440 | 3.77091E-43 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 405 | 440 | 1.5E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 317 | 355 | 0.0073 | IPR001680 |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 185 | 243 | 9.4E-7 | IPR024977 |
| Pfam | PF00400 | WD domain, G-beta repeat | 266 | 301 | 9.3E-7 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 160 | 440 | 2.2E-58 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 94 | 443 | 6.3E-124 | IPR015943 |
| SMART | SM00320 | WD40_4 | 401 | 440 | 1.1E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 220 | 258 | 3.3 | IPR001680 |
| SMART | SM00320 | WD40_4 | 358 | 398 | 290.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 178 | 217 | 1.4E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 262 | 301 | 7.8E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 313 | 355 | 0.0029 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 269 | 303 | 11.65559 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 185 | 226 | 12.01227 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 408 | 441 | 13.081652 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 408 | 441 | 10.864685 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 269 | 310 | 14.652308 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 185 | 222 | 8.808332 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 427 | 441 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 288 | 302 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 16 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 43 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33270.1 | Transducin family protein / WD-40 repeat family protein. putative cdc20 protein (CDC20.1) | 0 |
| RefSeq | XP_037442414.1 | cell division cycle 20.2, cofactor of APC complex-like [Triticum dicoccoides] | 0 |
| Q9SZA4 | Cell division cycle 20.1, cofactor of APC complex OS=Arabidopsis thaliana OX=3702 GN=CDC20-1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6LPB5 | ANAPC4_WD40 domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG044920.