Basic Information
Locus ID:
gene:TRIDC5BG044220
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
E3 ubiquitin-protein ligase UPL5
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 459832944 | 459834589 | + | gene:TRIDC5BG044220 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.27 | 47,502.81 Da | 60.95 | 93.05 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 52 | 120 | 5.7E-7 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 43 | 131 | 4.44E-14 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 45 | 139 | 4.7E-8 | - |
| SMART | SM00213 | ubq_7 | 49 | 118 | 5.8E-4 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 49 | 122 | 11.355081 | IPR000626 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 410 | 428 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 410 | 440 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_044381840.1 | E3 ubiquitin-protein ligase UPL5-like [Triticum aestivum] | 0 |
| TrEMBL | A0A453L3Y0 | Ubiquitin-like domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG044220.