Basic Information
Locus ID:
gene:TRIDC5BG043540
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 454410334 | 454419725 | + | gene:TRIDC5BG043540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.38 | 66,508.45 Da | 36.45 | 81.50 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 307 | 572 | 7.59154E-90 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 9 | 219 | 1.13137E-64 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 9 | 227 | 7.4E-50 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 302 | 509 | 7.8E-46 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 285 | 581 | 2.7E-76 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 9 | 220 | 7.0E-49 | IPR013320 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 378 | 584 | 1.0E-58 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 1 | 237 | 1.4E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 286 | 376 | 7.2E-32 | - |
| SMART | SM00220 | serkin_6 | 301 | 573 | 5.2E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 301 | 558 | 36.781628 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 307 | 330 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 421 | 433 | - | IPR008271 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 103 | 109 | - | IPR019825 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10530.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_045084931.1 | L-type lectin-domain containing receptor kinase IX.1-like [Aegilops tauschii subsp. strangulata] | 0 |
| Q9LXA5 | L-type lectin-domain containing receptor kinase IX.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK91 PE=1 SV=1 | 0 | |
| TrEMBL | M8BUU6 | Lectin-domain containing receptor kinase A4.3 OS=Aegilops tauschii OX=37682 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG043540.