Basic Information
Locus ID:
gene:TRIDC5BG042620
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 448267330 | 448271872 | + | gene:TRIDC5BG042620 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.11 | 73,430.53 Da | 39.03 | 83.26 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 49 | 303 | 1.81641E-70 | IPR001220 |
| CDD | cd14066 | STKc_IRAK | 386 | 659 | 1.15714E-88 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 383 | 655 | 6.3E-43 | IPR001245 |
| Pfam | PF00139 | Legume lectin domain | 50 | 311 | 8.9E-53 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 49 | 305 | 3.84E-55 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 360 | 658 | 1.28E-72 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 460 | 663 | 1.3E-54 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 47 | 318 | 9.4E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 365 | 459 | 7.3E-29 | - |
| SMART | SM00220 | serkin_6 | 380 | 663 | 5.1E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 380 | 663 | 36.032524 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 386 | 412 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 508 | 520 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06740.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_037442204.1 | probable L-type lectin-domain containing receptor kinase S.5 [Triticum dicoccoides] | 0 |
| Q9FG33 | Probable L-type lectin-domain containing receptor kinase S.5 OS=Arabidopsis thaliana OX=3702 GN=LECRKS5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6LM84 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG042620.