HalophFGD

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Basic Information
Locus ID: gene:TRIDC5BG042360
Species & Taxonomic ID: Triticum dicoccoides & 85692
Genome Assembly: GCF_002162155.2
Description: BTB/POZ domain
Maps and Mapping Data
Chromosome Start End Strand ID
5B 447011050 447013692 - gene:TRIDC5BG042360
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.08 39,288.50 Da 57.58 85.17 -0.35
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd18186 BTB_POZ_ZBTB_KLHL-like 165 248 2.17345E-20 -
Pfam PF00651 BTB/POZ domain 159 263 1.9E-19 IPR000210
SUPERFAMILY SSF54695 POZ domain 152 263 6.28E-23 IPR011333
Gene3D G3DSA:3.30.710.10 Potassium Channel Kv1.1; Chain A 138 294 1.7E-34 IPR011333
SMART SM00225 BTB_4 166 265 2.1E-17 IPR000210
ProSiteProfiles PS50097 BTB domain profile. 166 225 14.583856 IPR000210
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K10523 (speckle-type POZ protein)
Pathway:
ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_037438069.1 BTB/POZ domain-containing protein At1g55760-like [Triticum dicoccoides] 0
Swiss-Prot Q94420 Protein maternal effect lethal 26 OS=Caenorhabditis elegans OX=6239 GN=mel-26 PE=1 SV=2 0
TrEMBL A0A453L2V0 BTB domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 0
Expression
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BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC5BG042360.

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