Basic Information
Locus ID:
gene:TRIDC5BG042170
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 445194779 | 445198189 | + | gene:TRIDC5BG042170 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.90 | 115,996.49 Da | 39.00 | 105.39 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 464 | 524 | 6.4E-9 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 771 | 984 | 3.2E-35 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 321 | 380 | 3.3E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 75 | 5.0E-11 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 459 | 677 | 4.59E-46 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 236 | 529 | 1.19E-65 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 763 | 1053 | 1.25E-58 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 32 | 318 | 4.08E-61 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 100 | 334 | 9.0E-69 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 99 | 4.7E-8 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 611 | 697 | 3.8E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 433 | 533 | 1.8E-30 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 335 | 432 | 2.5E-29 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 754 | 846 | 2.0E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 847 | 1066 | 4.4E-52 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 534 | 610 | 6.8E-20 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 630 | 654 | 400.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 487 | 511 | 220.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 343 | 367 | 7.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 439 | 463 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 557 | 581 | 23.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 605 | 629 | 130.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 768 | 1025 | 1.5E-18 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 512 | 535 | 400.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 150 | 174 | 24.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 295 | 319 | 11.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 632 | 654 | 7.650349 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 768 | 1055 | 32.951313 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 897 | 909 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 774 | 797 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 343 | 356 | 4.1E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 129 | 142 | 4.1E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1058 | 1103 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56040.2 | Leucine-rich receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_037442154.1 | LRR receptor-like serine/threonine-protein kinase [Triticum dicoccoides] | 0 |
| F4K6B8 | Leucine-rich repeat receptor-like serine/threonine-protein kinase RGI4 OS=Arabidopsis thaliana OX=3702 GN=RGI4 PE=1 SV=1 | 0 | |
| TrEMBL | Q2L3U3 | CLAVATA-like kinase OS=Triticum aestivum OX=4565 GN=clk-1B PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG042170.