Basic Information
Locus ID:
gene:TRIDC5BG042130
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
F-box associated domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 445150965 | 445184853 | + | gene:TRIDC5BG042130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.52 | 61,413.21 Da | 54.64 | 82.60 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 15 | 44 | 1.5E-7 | IPR001810 |
| Pfam | PF08268 | F-box associated domain | 216 | 309 | 3.1E-6 | IPR013187 |
| SUPERFAMILY | SSF81383 | F-box domain | 14 | 71 | 3.27E-13 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 10 | 62 | 4.5E-9 | - |
| SMART | SM00256 | fbox_2 | 17 | 57 | 4.6E-6 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 107 | 316 | 4.3E-22 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 11 | 58 | 11.48455 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 494 | 535 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 494 | 519 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02030.1 | F-box family protein. | 0 |
| RefSeq | XP_037438062.1 | putative F-box only protein 9 [Triticum dicoccoides] | 0 |
| Q9ZPS1 | Putative F-box protein At2g02030 OS=Arabidopsis thaliana OX=3702 GN=At2g02030 PE=4 SV=1 | 0 | |
| TrEMBL | A0A3B6LM49 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG042130.