Basic Information
Locus ID:
gene:TRIDC5BG042080
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
F-box associated domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 444824774 | 444826689 | + | gene:TRIDC5BG042080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.27 | 54,201.56 Da | 39.94 | 81.62 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08268 | F-box associated domain | 221 | 318 | 2.9E-8 | IPR013187 |
| Pfam | PF00646 | F-box domain | 18 | 55 | 7.4E-8 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 16 | 74 | 1.44E-13 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 10 | 59 | 5.6E-10 | - |
| SMART | SM00256 | fbox_2 | 21 | 61 | 9.4E-5 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 112 | 342 | 1.0E-27 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 15 | 52 | 9.25902 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G07870.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_037441550.1 | uncharacterized protein LOC119309703 [Triticum dicoccoides] | 0 |
| Q9SFC7 | F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1 | 0 | |
| TrEMBL | A0A453L2C5 | F-box domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG042080.