Basic Information
Locus ID:
gene:TRIDC5BG041200
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 437872108 | 437876420 | - | gene:TRIDC5BG041200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 82,973.21 Da | 42.14 | 81.83 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 435 | 703 | 2.42425E-88 | - |
| CDD | cd00054 | EGF_CA | 310 | 340 | 3.43358E-6 | - |
| Pfam | PF00069 | Protein kinase domain | 430 | 703 | 6.4E-47 | IPR000719 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 48 | 107 | 2.6E-10 | IPR025287 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 308 | 346 | 1.85E-6 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 412 | 700 | 1.62E-74 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 402 | 504 | 1.4E-31 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 257 | 349 | 2.3E-12 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 505 | 720 | 5.6E-52 | - |
| SMART | SM00181 | egf_5 | 313 | 349 | 0.03 | IPR000742 |
| SMART | SM00220 | serkin_6 | 429 | 712 | 9.1E-37 | IPR000719 |
| SMART | SM00181 | egf_5 | 261 | 309 | 2.7 | IPR000742 |
| SMART | SM00179 | egfca_6 | 310 | 349 | 1.2E-6 | IPR001881 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 310 | 349 | 9.850594 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 429 | 712 | 38.675583 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 549 | 561 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 435 | 457 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21240.1 | wall associated kinase 3. encodes a wall-associated kinase | 0 |
| RefSeq | XP_037442010.1 | putative wall-associated receptor kinase-like 16 [Triticum dicoccoides] | 0 |
| Q9LMN8 | Wall-associated receptor kinase 3 OS=Arabidopsis thaliana OX=3702 GN=WAK3 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6LNE4 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG041200.