Basic Information
Locus ID:
gene:TRIDC5BG040980
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 436190152 | 436191609 | - | gene:TRIDC5BG040980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.63 | 37,410.78 Da | 68.74 | 79.38 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 154 | 197 | 1.97748E-17 | - |
| Pfam | PF13639 | Ring finger domain | 154 | 197 | 8.8E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 154 | 204 | 2.15E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 134 | 202 | 9.4E-19 | IPR013083 |
| SMART | SM00184 | ring_2 | 155 | 196 | 5.2E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 155 | 197 | 12.297489 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 311 | 341 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 211 | 270 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 313 | 341 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 235 | 260 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33565.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037441989.1 | E3 ubiquitin-protein ligase RING1-like [Triticum dicoccoides] | 0 |
| Q9SRQ8 | RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6LLU7 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG040980.