Basic Information
Locus ID:
gene:TRIDC5BG039470
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 424226014 | 424227529 | + | gene:TRIDC5BG039470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 47,651.90 Da | 47.20 | 100.28 | 0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 16 | 48 | 2.4E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 12 | 48 | 1.83E-9 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 83 | 303 | 7.06E-15 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 12 | 54 | 6.1E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 64 | 420 | 1.4E-14 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G10780.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_037441763.1 | F-box protein At1g10780-like [Triticum dicoccoides] | 0 |
| Q9SAC4 | F-box protein At1g10780 OS=Arabidopsis thaliana OX=3702 GN=At1g10780 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6LN88 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG039470.