Basic Information
Locus ID:
gene:TRIDC5BG037920
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
CIPK6
Description:
Non-specific serine threonine protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 409015430 | 409017325 | - | gene:TRIDC5BG037920 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.08 | 48,006.52 Da | 31.77 | 88.86 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12195 | CIPK_C | 305 | 425 | 9.00805E-46 | - |
| Pfam | PF03822 | NAF domain | 301 | 365 | 2.7E-19 | IPR004041 |
| Pfam | PF00069 | Protein kinase domain | 16 | 271 | 8.9E-72 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 13 | 291 | 1.75E-91 | IPR011009 |
| Gene3D | G3DSA:3.30.310.80 | Kinase associated domain 1, KA1 | 299 | 430 | 4.8E-38 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 7 | 298 | 1.9E-101 | - |
| SMART | SM00220 | serkin_6 | 16 | 271 | 7.8E-106 | IPR000719 |
| ProSiteProfiles | PS50816 | NAF domain profile. | 299 | 323 | 12.878716 | IPR018451 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 16 | 271 | 52.583439 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 135 | 147 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 22 | 49 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G30960.1 | SOS3-interacting protein 3. Encodes CBL-interacting protein kinase 6 (CIPK6). Required for development and salt tolerance. | 0 |
| RefSeq | XP_037441533.1 | putative CBL-interacting protein kinase 27 [Triticum dicoccoides] | 0 |
| Q6Z9F4 | CBL-interacting protein kinase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=CIPK6 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6LMK4 | non-specific serine/threonine protein kinase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG037920.