Basic Information
Locus ID:
gene:TRIDC5BG037710
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
ubiquitin-NEDD8-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 408195105 | 408195622 | - | gene:TRIDC5BG037710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.91 | 8,753.23 Da | 55.70 | 103.92 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 2 | 41 | 1.6E-11 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 2 | 41 | 4.37E-11 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 67 | 2.2E-17 | - |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 1 | 42 | 12.814033 | IPR000626 |
| PRINTS | PR00348 | Ubiquitin signature | 31 | 51 | 1.3E-5 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 10 | 30 | 1.3E-5 | IPR019956 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35635.1 | ubiquitin 7. encodes a ubiquitin-like protein that contains tandem repeats of the ubiquitin coding region, but at least one repeat per gene encodes a protein with amino acid substitutions. | 0 |
| RefSeq | XP_039807607.1 | ubiquitin-NEDD8-like protein RUB2 isoform X1 [Panicum virgatum] | 0 |
| P0C030 | Ubiquitin-NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica OX=39947 GN=RUB1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3L6DWR2 | Ubiquitin-NEDD8-like protein RUB2 (Fragment) OS=Zea mays OX=4577 GN=RUB2_0 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG037710.