Basic Information
Locus ID:
gene:TRIDC5BG036530
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 397480138 | 397483946 | + | gene:TRIDC5BG036530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.04 | 36,183.44 Da | 50.21 | 76.50 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 242 | 284 | 1.1E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 237 | 290 | 1.09E-19 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 205 | 290 | 5.5E-21 | IPR013083 |
| SMART | SM00184 | ring_2 | 243 | 283 | 2.7E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 243 | 284 | 12.518784 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 323 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 313 | - | - |
| Coils | Coil | Coil | 95 | 115 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G20910.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037441394.1 | E3 ubiquitin-protein ligase AIP2-like [Triticum dicoccoides] | 0 |
| Q8RXD3 | E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana OX=3702 GN=AIP2 PE=1 SV=1 | 0 | |
| TrEMBL | C0KTZ6 | ABI3-interacting protein 2-1 protein OS=Triticum aestivum OX=4565 GN=AIP2-2 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG036530.