Basic Information
Locus ID:
gene:TRIDC5BG036480
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
In Between Ring fingers
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 397109345 | 397110365 | + | gene:TRIDC5BG036480 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.66 | 36,186.42 Da | 58.66 | 76.71 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00097 | Zinc finger, C3HC4 type (RING finger) | 277 | 322 | 9.4E-5 | IPR018957 |
| SUPERFAMILY | SSF57850 | RING/U-box | 273 | 328 | 9.32E-14 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 271 | 340 | 1.0E-13 | IPR013083 |
| ProSiteProfiles | PS51873 | TRIAD supradomain profile. | 273 | 340 | 12.169317 | IPR044066 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 277 | 322 | 9.45016 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 295 | 304 | - | IPR017907 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_044393125.1 | uncharacterized protein LOC123116193 [Triticum aestivum] | 0 |
| TrEMBL | A0A3B6LKS6 | RBR-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG036480.