Basic Information
Locus ID:
gene:TRIDC5BG035240
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
zinc finger, C3HC4 type domain containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 387084991 | 387091671 | + | gene:TRIDC5BG035240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 46,268.45 Da | 35.74 | 119.31 | 0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 346 | 387 | 5.1E-10 | - |
| Pfam | PF10269 | Transmembrane Fragile-X-F protein | 1 | 220 | 2.9E-59 | IPR019396 |
| SUPERFAMILY | SSF57850 | RING/U-box | 337 | 389 | 1.77E-6 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 323 | 392 | 5.6E-14 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 347 | 382 | 10.48287 | IPR001841 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G73950.1 | Transmembrane Fragile-X-F-associated protein. | 0 |
| RefSeq | XP_037441288.1 | uncharacterized protein LOC119309375 [Triticum dicoccoides] | 0 |
| A9ULZ2 | Baculoviral IAP repeat-containing protein 7-B OS=Xenopus laevis OX=8355 GN=birc7-b PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6LM30 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG035240.