Basic Information
Locus ID:
gene:TRIDC5BG033790
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-H2 zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 368794222 | 368795574 | + | gene:TRIDC5BG033790 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.72 | 39,492.18 Da | 49.18 | 82.90 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 146 | 189 | 2.35123E-19 | - |
| Pfam | PF13639 | Ring finger domain | 146 | 189 | 1.2E-14 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 128 | 195 | 1.06E-21 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 104 | 194 | 2.4E-21 | IPR013083 |
| SMART | SM00184 | ring_2 | 147 | 188 | 1.7E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 147 | 189 | 13.020386 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 339 | 372 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 346 | 372 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 205 | 225 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40250.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037441172.1 | RING-H2 finger protein ATL46-like [Triticum dicoccoides] | 0 |
| Q9FL07 | RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6LLS7 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG033790.