Basic Information
Locus ID:
gene:TRIDC5BG032070
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Anaphase-promoting complex subunit 4 WD40 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 347799670 | 347803590 | + | gene:TRIDC5BG032070 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.53 | 61,451.11 Da | 56.89 | 74.87 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 244 | 533 | 1.07486E-42 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 498 | 533 | 2.4E-5 | IPR001680 |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 278 | 335 | 1.5E-4 | IPR024977 |
| Pfam | PF00400 | WD domain, G-beta repeat | 359 | 394 | 1.2E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 410 | 448 | 0.0029 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 241 | 536 | 2.47E-54 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 184 | 536 | 5.0E-114 | IPR015943 |
| SMART | SM00320 | WD40_4 | 313 | 351 | 3.1 | IPR001680 |
| SMART | SM00320 | WD40_4 | 355 | 394 | 3.5E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 451 | 491 | 440.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 494 | 533 | 9.2E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 406 | 448 | 0.002 | IPR001680 |
| SMART | SM00320 | WD40_4 | 271 | 310 | 0.025 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 362 | 394 | 12.947979 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 278 | 319 | 9.906923 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 501 | 534 | 11.260138 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 501 | 534 | 13.582925 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 362 | 394 | 10.759232 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 520 | 534 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 80 | 110 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 55 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33260.1 | Transducin family protein / WD-40 repeat family protein. putative cdc20 protein (CDC20.2) | 0 |
| RefSeq | XP_037440962.1 | cell division cycle 20.2, cofactor of APC complex-like [Triticum dicoccoides] | 0 |
| Q9S7I8 | Cell division cycle 20.2, cofactor of APC complex OS=Arabidopsis thaliana OX=3702 GN=CDC20-2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453KN89 | ANAPC4_WD40 domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG032070.