Basic Information
Locus ID:
gene:TRIDC5BG031660
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
NB-ARC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 343580132 | 343598037 | + | gene:TRIDC5BG031660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.16 | 193,242.56 Da | 46.85 | 100.97 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 557 | 599 | 6.9E-7 | IPR001611 |
| Pfam | PF18052 | Rx N-terminal domain | 2 | 75 | 1.2E-6 | IPR041118 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1361 | 1541 | 7.1E-22 | IPR001245 |
| Pfam | PF00931 | NB-ARC domain | 154 | 380 | 9.4E-31 | IPR002182 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1330 | 1623 | 2.89E-43 | IPR011009 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 150 | 418 | 3.24E-49 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 802 | 1130 | 2.89E-13 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 490 | 887 | 2.95E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 534 | 908 | 2.1E-70 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1423 | 1640 | 6.5E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 949 | 1140 | 1.2E-11 | IPR032675 |
| Gene3D | G3DSA:1.10.10.10 | - | 399 | 503 | 7.2E-8 | IPR036388 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1310 | 1422 | 5.7E-16 | - |
| Gene3D | G3DSA:1.20.5.4130 | - | 1 | 101 | 9.8E-7 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 142 | 309 | 1.1E-25 | IPR027417 |
| SMART | SM00369 | LRR_typ_2 | 566 | 589 | 1.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 612 | 635 | 5.5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 871 | 894 | 300.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 755 | 778 | 260.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 614 | 635 | 7.00349 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1348 | 1622 | 21.940928 | IPR000719 |
| PRINTS | PR00364 | Disease resistance protein signature | 777 | 793 | 1.0E-12 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 353 | 367 | 1.0E-12 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 174 | 189 | 1.0E-12 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 257 | 271 | 1.0E-12 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1658 | 1709 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1676 | 1709 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G11520.1 | calmodulin-binding receptor-like cytoplasmic kinase 3. high overall homology to CRCK1 | 0 |
| RefSeq | XP_037440913.1 | putative disease resistance protein RGA3 isoform X1 [Triticum dicoccoides] | 0 |
| Q9ASQ5 | Calmodulin-binding receptor-like cytoplasmic kinase 3 OS=Arabidopsis thaliana OX=3702 GN=CRCK3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6LL70 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG031660.