Basic Information
Locus ID:
gene:TRIDC5BG031580
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 342187875 | 342191256 | - | gene:TRIDC5BG031580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.90 | 104,401.34 Da | 38.78 | 106.17 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 110 | 131 | 0.43 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 41 | 80 | 3.9E-6 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 682 | 947 | 4.7E-47 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 480 | 531 | 2.0E-6 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 90 | 412 | 6.75E-62 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 672 | 950 | 7.55E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 327 | 586 | 5.44E-49 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 326 | 608 | 3.7E-81 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 761 | 967 | 1.6E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 663 | 760 | 1.1E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 40 | 323 | 1.4E-72 | IPR032675 |
| SMART | SM00220 | serkin_6 | 680 | 950 | 5.1E-32 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 278 | 302 | 8.9 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 108 | 132 | 57.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 494 | 517 | 69.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 518 | 542 | 9.1 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 230 | 254 | 42.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 680 | 954 | 36.68269 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 805 | 817 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 497 | 510 | 7.8E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 518 | 531 | 7.8E-6 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_037440902.1 | receptor-like protein kinase HSL1 [Triticum dicoccoides] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6LL79 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG031580.