Basic Information
Locus ID:
gene:TRIDC5BG031490
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-H2 zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 341793593 | 341799060 | - | gene:TRIDC5BG031490 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.92 | 45,528.32 Da | 51.36 | 80.99 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16474 | RING-H2_RNF111_like | 336 | 378 | 4.23245E-19 | - |
| Pfam | PF13639 | Ring finger domain | 337 | 378 | 1.1E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 327 | 382 | 1.13E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 322 | 383 | 5.2E-19 | IPR013083 |
| SMART | SM00744 | ringv_2 | 336 | 378 | 0.008 | IPR011016 |
| SMART | SM00184 | ring_2 | 337 | 377 | 3.6E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 337 | 378 | 12.415513 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 65 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 44 | 65 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 156 | 171 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 148 | 171 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 29 | 43 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32600.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037440898.1 | E3 ubiquitin-protein ligase At1g63170-like isoform X1 [Triticum dicoccoides] | 0 |
| Q8LDB8 | E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g63170 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6KFY9 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG031490.