Basic Information
Locus ID:
gene:TRIDC5BG030590
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 332533202 | 332538866 | - | gene:TRIDC5BG030590 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.71 | 60,895.50 Da | 58.30 | 77.07 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00097 | Zinc finger, C3HC4 type (RING finger) | 108 | 158 | 9.9E-7 | IPR018957 |
| SUPERFAMILY | SSF53300 | vWA-like | 290 | 420 | 4.89E-8 | IPR036465 |
| SUPERFAMILY | SSF57850 | RING/U-box | 102 | 167 | 4.12E-14 | - |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 284 | 441 | 3.1E-7 | IPR036465 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 95 | 207 | 8.4E-11 | IPR013083 |
| SMART | SM00184 | ring_2 | 108 | 158 | 1.9E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 108 | 159 | 11.559839 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G54780.3 | Zinc finger (C3HC4-type RING finger) family protein. | 0 |
| RefSeq | XP_044396984.1 | E3 ubiquitin-protein ligase WAV3-like [Triticum aestivum] | 0 |
| Q0WQX9 | Probable E3 ubiquitin-protein ligase WAVH2 OS=Arabidopsis thaliana OX=3702 GN=WAVH2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6MQM2 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG030590.