Basic Information
Locus ID:
gene:TRIDC5BG028900
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 312633134 | 312633650 | + | gene:TRIDC5BG028900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.87 | 16,571.47 Da | 46.64 | 77.76 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 69 | 111 | 7.55978E-17 | - |
| Pfam | PF13639 | Ring finger domain | 69 | 111 | 1.0E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 69 | 116 | 4.54E-19 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 63 | 127 | 1.8E-18 | IPR013083 |
| SMART | SM00184 | ring_2 | 70 | 110 | 6.4E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 70 | 111 | 11.943417 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 118 | 142 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44578.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037437857.1 | E3 ubiquitin-protein ligase SIRP1-like [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B6LIY0 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG028900.