Basic Information
Locus ID:
gene:TRIDC5BG027720
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine Rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 299676763 | 299679946 | + | gene:TRIDC5BG027720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.51 | 84,810.07 Da | 43.13 | 95.09 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 500 | 797 | 6.2E-24 | IPR000719 |
| Pfam | PF13516 | Leucine Rich repeat | 128 | 141 | 0.85 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 52 | 91 | 6.5E-9 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 499 | 800 | 3.19E-44 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 53 | 310 | 4.68E-46 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 573 | 812 | 8.3E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 51 | 219 | 5.2E-40 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 460 | 570 | 2.0E-12 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 221 | 311 | 8.5E-19 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 174 | 198 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 126 | 150 | 5.8 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 220 | 243 | 68.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 494 | 802 | 24.909067 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 404 | 449 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 656 | 711 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G67280.1 | receptor-like kinase. | 0 |
| RefSeq | XP_037440618.1 | probable LRR receptor-like serine/threonine-protein kinase At4g37250 [Triticum dicoccoides] | 0 |
| Q94C77 | Receptor protein kinase-like protein At4g34220 OS=Arabidopsis thaliana OX=3702 GN=At4g34220 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6LK79 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG027720.