Basic Information
Locus ID:
gene:TRIDC5BG026620
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
UBA1
Description:
Activates ubiquitin by first adenylating its C-terminal glycine residue with ATP, and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding a ubiquitin- E1 thioester and free AMP
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 288368322 | 288374844 | + | gene:TRIDC5BG026620 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.10 | 116,927.30 Da | 34.69 | 85.27 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01490 | Ube1_repeat2 | 464 | 1004 | 0.0 | - |
| CDD | cd01491 | Ube1_repeat1 | 47 | 432 | 3.59466E-158 | - |
| Pfam | PF00899 | ThiF family | 445 | 946 | 3.2E-76 | IPR000594 |
| Pfam | PF16191 | Ubiquitin-activating enzyme E1 four-helix bundle | 294 | 363 | 2.4E-20 | IPR032420 |
| Pfam | PF16190 | Ubiquitin-activating enzyme E1 FCCH domain | 222 | 292 | 3.0E-27 | IPR032418 |
| Pfam | PF00899 | ThiF family | 49 | 426 | 1.2E-29 | IPR000594 |
| Pfam | PF10585 | Ubiquitin-activating enzyme active site | 632 | 886 | 7.9E-82 | IPR019572 |
| Pfam | PF09358 | Ubiquitin fold domain | 957 | 1046 | 6.0E-26 | IPR018965 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 439 | 941 | 1.24E-128 | IPR035985 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 42 | 429 | 1.96E-103 | IPR035985 |
| Gene3D | G3DSA:3.10.290.60 | - | 959 | 1049 | 7.4E-24 | IPR038252 |
| Gene3D | G3DSA:3.40.50.12550 | - | 166 | 455 | 8.5E-109 | - |
| Gene3D | G3DSA:3.40.50.720 | - | 465 | 944 | 2.8E-189 | - |
| Gene3D | G3DSA:2.40.30.180 | - | 210 | 291 | 8.5E-109 | IPR042302 |
| Gene3D | G3DSA:3.50.50.80 | - | 38 | 156 | 1.7E-38 | IPR042449 |
| Gene3D | G3DSA:1.10.10.2660 | - | 617 | 893 | 2.8E-189 | IPR042063 |
| SMART | SM00985 | UBA_e1_C_a_2 | 924 | 1046 | 7.2E-51 | IPR018965 |
| TIGRFAM | TIGR01408 | Ube1: ubiquitin-activating enzyme E1 | 42 | 1051 | 0.0 | IPR018075 |
| ProSitePatterns | PS00865 | Ubiquitin-activating enzyme active site. | 624 | 632 | - | IPR033127 |
| ProSitePatterns | PS00536 | Ubiquitin-activating enzyme signature 1. | 407 | 415 | - | IPR018074 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 492 | 515 | 1.8E-64 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 539 | 564 | 1.8E-64 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 184 | 211 | 1.8E-64 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 69 | 93 | 1.8E-64 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 693 | 720 | 1.8E-64 | IPR000011 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 42 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G30110.1 | ubiquitin-activating enzyme 1. Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. Mutant is able to revert the constitutive defense responses phenotype of snc1, which indicates the gene is involved in defense response. It also indicates that ubiquitination plays a role in plant defense signalling. | 0 |
| RefSeq | XP_037440545.1 | ubiquitin-activating enzyme E1 1 [Triticum dicoccoides] | 0 |
| P20973 | Ubiquitin-activating enzyme E1 1 OS=Triticum aestivum OX=4565 GN=UBA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6LIE8 | E1 ubiquitin-activating enzyme OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG026620.