Basic Information
Locus ID:
gene:TRIDC5BG025620
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 279311305 | 279324529 | - | gene:TRIDC5BG025620 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.47 | 56,927.56 Da | 68.53 | 61.61 | -0.71 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 335 | 376 | 1.5E-9 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 327 | 382 | 9.94E-19 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 296 | 382 | 2.0E-17 | IPR013083 |
| SMART | SM00184 | ring_2 | 335 | 375 | 1.9E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 335 | 376 | 12.238477 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 224 | 246 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 59 | 87 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01980.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037440482.1 | uncharacterized protein LOC119308453 isoform X1 [Triticum dicoccoides] | 0 |
| P0CH30 | E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6LI63 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG025620.