Basic Information
Locus ID:
gene:TRIDC5BG024550
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
CPK17
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 267120369 | 267122758 | + | gene:TRIDC5BG024550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.05 | 61,880.39 Da | 37.62 | 76.97 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 105 | 362 | 3.78333E-132 | - |
| Pfam | PF13499 | EF-hand domain pair | 480 | 543 | 4.5E-15 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 411 | 471 | 2.0E-14 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 105 | 363 | 3.3E-71 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 104 | 371 | 9.98E-84 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 403 | 543 | 4.24E-47 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 375 | 545 | 2.0E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 107 | 190 | 1.1E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 191 | 374 | 2.3E-55 | - |
| SMART | SM00054 | efh_1 | 482 | 510 | 0.0025 | IPR002048 |
| SMART | SM00054 | efh_1 | 410 | 438 | 2.0E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 517 | 545 | 1.3E-6 | IPR002048 |
| SMART | SM00220 | serkin_6 | 105 | 363 | 1.4E-94 | IPR000719 |
| SMART | SM00054 | efh_1 | 446 | 474 | 1.4E-4 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 442 | 477 | 12.030714 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 478 | 513 | 14.457615 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 105 | 363 | 47.438663 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 516 | 548 | 11.919133 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 406 | 441 | 15.545536 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 491 | 503 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 225 | 237 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 455 | 467 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 419 | 431 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 111 | 138 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 526 | 538 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 38 | 94 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12180.1 | calcium-dependent protein kinase 17. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_037437818.1 | calcium-dependent protein kinase 25-like [Triticum dicoccoides] | 0 |
| Q2RAV0 | Calcium-dependent protein kinase 25 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK25 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6LJG8 | Calcium-dependent protein kinase 17 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG024550.