HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene:TRIDC5BG022510
Species & Taxonomic ID: Triticum dicoccoides & 85692
Genome Assembly: GCF_002162155.2
Description: Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
Chromosome Start End Strand ID
5B 242748432 242752571 + gene:TRIDC5BG022510
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.38 54,632.50 Da 58.55 82.47 -0.16
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00069 Protein kinase domain 114 267 4.5E-33 IPR000719
Pfam PF00069 Protein kinase domain 351 454 1.1E-20 IPR000719
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 99 478 1.79E-73 IPR011009
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 350 472 3.9E-37 -
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 111 196 3.4E-43 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 197 264 3.4E-43 -
SMART SM00220 serkin_6 112 454 5.8E-78 IPR000719
ProSiteProfiles PS50011 Protein kinase domain profile. 112 454 42.562435 IPR000719
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 234 246 - IPR008271
MobiDBLite mobidb-lite consensus disorder prediction 1 24 - -
MobiDBLite mobidb-lite consensus disorder prediction 58 88 - -
MobiDBLite mobidb-lite consensus disorder prediction 481 510 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 88 - -
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G44610.1 Protein kinase superfamily protein. 0
RefSeq XP_037440264.1 serine/threonine-protein kinase D6PKL2-like [Triticum dicoccoides] 0
Swiss-Prot Q9LTW5 Serine/threonine-protein kinase AGC1-5 OS=Arabidopsis thaliana OX=3702 GN=AGC1-5 PE=1 SV=1 0
TrEMBL A0A3B6LJ33 Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC5BG022510.

Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.