Basic Information
Locus ID:
gene:TRIDC5BG022210
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ring finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 239222945 | 239245975 | - | gene:TRIDC5BG022210 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.67 | 123,003.85 Da | 57.69 | 51.76 | -0.81 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF57850 | RING/U-box | 12 | 71 | 1.92E-7 | - |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 84 | 138 | 9.81E-6 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 8 | 119 | 7.3E-14 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 20 | 59 | 9.715714 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 37 | 46 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 491 | 513 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 370 | 413 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 376 | 413 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 425 | 448 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 297 | 317 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 425 | 456 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 669 | 701 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 297 | 328 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 491 | 527 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 564 | 613 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1109 | 1133 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 564 | 615 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 658 | 701 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_037440244.1 | trithorax group protein osa-like [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B6LJ83 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG022210.