Basic Information
Locus ID:
gene:TRIDC5BG020990
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 219664980 | 219668373 | + | gene:TRIDC5BG020990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.47 | 80,866.54 Da | 52.44 | 65.65 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 320 | 352 | 2.5E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 457 | 493 | 0.012 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 415 | 451 | 8.0E-7 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 602 | 627 | 0.077 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 315 | 633 | 2.33E-54 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 305 | 648 | 4.4E-59 | IPR015943 |
| SMART | SM00320 | WD40_4 | 454 | 493 | 3.8E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 413 | 451 | 4.0E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 314 | 353 | 9.4E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 495 | 534 | 1.9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 587 | 628 | 0.19 | IPR001680 |
| SMART | SM00320 | WD40_4 | 550 | 586 | 7.3 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 460 | 502 | 12.045688 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 321 | 354 | 11.471045 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 460 | 494 | 9.99469 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 420 | 451 | 10.996502 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 321 | 354 | 13.85027 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 420 | 460 | 13.917108 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 340 | 354 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 340 | 354 | 2.3E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 480 | 494 | 2.3E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 438 | 452 | 2.3E-6 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 160 | 174 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 285 | 302 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 217 | 246 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 375 | 398 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 95 | 109 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 59 | 130 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 150 | 194 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 302 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G15470.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037440164.1 | WD repeat-containing protein 44-like [Triticum dicoccoides] | 0 |
| Q498F0 | WD repeat-containing protein 44 OS=Xenopus laevis OX=8355 GN=wdr44 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6LIZ1 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG020990.