Basic Information
Locus ID:
gene:TRIDC5BG020720
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 214825540 | 214835442 | - | gene:TRIDC5BG020720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.98 | 60,185.20 Da | 41.15 | 67.81 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 306 | 335 | 2.3E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 352 | 377 | 0.0061 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 156 | 518 | 2.98E-37 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 20 | 529 | 1.2E-97 | IPR015943 |
| SMART | SM00320 | WD40_4 | 296 | 335 | 5.6E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 230 | 267 | 3.3 | IPR001680 |
| SMART | SM00320 | WD40_4 | 380 | 432 | 0.75 | IPR001680 |
| SMART | SM00320 | WD40_4 | 338 | 377 | 0.0042 | IPR001680 |
| SMART | SM00320 | WD40_4 | 482 | 519 | 17.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 345 | 386 | 10.441614 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 310 | 344 | 9.572741 | IPR001680 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53390.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037440148.1 | dystrophia myotonica WD repeat-containing protein-like [Triticum dicoccoides] | 0 |
| A1DMI8 | Probable catabolite repression protein creC OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=creC PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B6LIP4 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG020720.