Basic Information
Locus ID:
gene:TRIDC5BG020330
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 204182563 | 204186448 | - | gene:TRIDC5BG020330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.87 | 104,328.99 Da | 31.94 | 102.21 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 396 | 455 | 1.3E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 209 | 268 | 1.9E-9 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 700 | 955 | 5.8E-20 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 518 | 574 | 2.0E-9 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 698 | 958 | 6.78E-39 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 267 | 597 | 1.1E-58 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 66 | 346 | 8.16E-43 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 44 | 207 | 5.4E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 208 | 301 | 1.7E-24 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 668 | 766 | 9.6E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 302 | 603 | 1.8E-84 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 768 | 962 | 1.5E-37 | - |
| SMART | SM00369 | LRR_typ_2 | 561 | 583 | 27.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 419 | 442 | 310.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 537 | 560 | 44.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 185 | 209 | 89.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 112 | 135 | 42.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 255 | 279 | 14.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 443 | 467 | 48.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 491 | 517 | 130.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 666 | 962 | 21.799587 | IPR000719 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 537 | 550 | 1.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 234 | 247 | 1.9E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 589 | 608 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G34420.1 | leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_037440105.1 | leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 [Triticum dicoccoides] | 0 |
| O22938 | Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 OS=Arabidopsis thaliana OX=3702 GN=PXC3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6LIK7 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG020330.