Basic Information
Locus ID:
gene:TRIDC5BG018790
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Domain of Unknown Function (DUF913)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 173785699 | 173801728 | - | gene:TRIDC5BG018790 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.12 | 401,250.63 Da | 47.82 | 90.18 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14327 | UBA_atUPL1_2_like | 1297 | 1334 | 5.29126E-14 | - |
| CDD | cd00078 | HECTc | 3269 | 3628 | 2.38262E-152 | IPR000569 |
| Pfam | PF06025 | Domain of Unknown Function (DUF913) | 477 | 800 | 2.7E-55 | IPR010314 |
| Pfam | PF14377 | Ubiquitin binding region | 2587 | 2619 | 2.1E-11 | IPR025527 |
| Pfam | PF14377 | Ubiquitin binding region | 2627 | 2658 | 1.5E-6 | IPR025527 |
| Pfam | PF06012 | Domain of Unknown Function (DUF908) | 111 | 414 | 9.0E-39 | IPR010309 |
| Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 3319 | 3629 | 9.2E-94 | IPR000569 |
| Pfam | PF00627 | UBA/TS-N domain | 1295 | 1331 | 6.4E-6 | IPR015940 |
| Pfam | PF14377 | Ubiquitin binding region | 2550 | 2576 | 1.8E-8 | IPR025527 |
| SUPERFAMILY | SSF46934 | UBA-like | 1278 | 1344 | 6.13E-15 | IPR009060 |
| SUPERFAMILY | SSF56204 | Hect, E3 ligase catalytic domain | 3259 | 3622 | 5.1E-124 | IPR035983 |
| SUPERFAMILY | SSF48371 | ARM repeat | 110 | 556 | 6.99E-10 | IPR016024 |
| SUPERFAMILY | SSF48371 | ARM repeat | 406 | 800 | 3.57E-8 | IPR016024 |
| Gene3D | G3DSA:1.25.10.10 | - | 328 | 801 | 1.0E-8 | IPR011989 |
| Gene3D | G3DSA:3.30.2410.10 | Hect, E3 ligase catalytic domain | 3511 | 3630 | 1.3E-48 | - |
| Gene3D | G3DSA:6.10.250.1630 | - | 2587 | 2622 | 5.2E-6 | - |
| Gene3D | G3DSA:3.30.2160.10 | Hect, E3 ligase catalytic domain | 3390 | 3474 | 2.0E-96 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 1292 | 1364 | 1.5E-17 | - |
| Gene3D | G3DSA:3.90.1750.10 | Hect, E3 ligase catalytic domains | 3243 | 3507 | 2.0E-96 | - |
| SMART | SM00119 | hect_3 | 3287 | 3630 | 2.2E-164 | IPR000569 |
| SMART | SM00165 | uba_6 | 1295 | 1333 | 4.8E-9 | IPR015940 |
| ProSiteProfiles | PS50237 | HECT domain profile. | 3289 | 3630 | 110.324394 | IPR000569 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 1293 | 1334 | 14.956604 | IPR015940 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2696 | 2717 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2181 | 2205 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2503 | 2554 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1002 | 1019 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2132 | 2166 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2095 | 2131 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2387 | 2404 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2922 | 2965 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2368 | 2386 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 992 | 1030 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 925 | 944 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 3170 | 3199 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2475 | 2492 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 3173 | 3197 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2095 | 2205 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2922 | 2946 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2571 | 2588 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2328 | 2591 | - | - |
| Coils | Coil | Coil | 2898 | 2925 | - | - |
| Coils | Coil | Coil | 2608 | 2628 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55860.1 | ubiquitin-protein ligase 1. encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis. | 0 |
| RefSeq | XP_037440021.1 | E3 ubiquitin-protein ligase UPL2-like [Triticum dicoccoides] | 0 |
| Q8GY23 | E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana OX=3702 GN=UPL1 PE=1 SV=3 | 0 | |
| TrEMBL | A0A3B6LGV2 | HECT-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG018790.