Basic Information
Locus ID:
gene:TRIDC5BG018720
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
CPK1
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 172818474 | 172854186 | - | gene:TRIDC5BG018720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.47 | 67,012.23 Da | 55.43 | 76.93 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 157 | 415 | 1.44323E-140 | - |
| CDD | cd00051 | EFh | 537 | 594 | 1.53961E-18 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 464 | 523 | 4.9E-10 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 533 | 594 | 5.9E-13 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 158 | 416 | 7.7E-74 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 156 | 417 | 6.2E-84 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 455 | 595 | 4.88E-44 | IPR011992 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 160 | 243 | 4.2E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 244 | 440 | 2.5E-58 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 441 | 598 | 9.3E-57 | - |
| SMART | SM00054 | efh_1 | 534 | 562 | 0.0017 | IPR002048 |
| SMART | SM00220 | serkin_6 | 158 | 416 | 1.8E-97 | IPR000719 |
| SMART | SM00054 | efh_1 | 499 | 526 | 7.9 | IPR002048 |
| SMART | SM00054 | efh_1 | 463 | 491 | 2.1E-7 | IPR002048 |
| SMART | SM00054 | efh_1 | 568 | 596 | 1.3E-6 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 568 | 599 | 11.556493 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 530 | 565 | 15.350267 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 158 | 416 | 48.032291 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 459 | 494 | 16.047653 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 577 | 589 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 472 | 484 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 507 | 519 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 164 | 191 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 278 | 290 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 543 | 555 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 144 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 114 | 144 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 52 | 113 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 51 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G38910.1 | calcium-dependent protein kinase 20. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_037440018.1 | calcium-dependent protein kinase 27-like isoform X1 [Triticum dicoccoides] | 0 |
| Q2QQR2 | Calcium-dependent protein kinase 27 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK27 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B6LI85 | Calcium-dependent protein kinase 20 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG018720.