Basic Information
Locus ID:
gene:TRIDC5BG015110
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 123745928 | 123758563 | + | gene:TRIDC5BG015110 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.77 | 72,401.18 Da | 48.49 | 74.50 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00130 | PAS | 15 | 116 | 5.98912E-16 | IPR000014 |
| CDD | cd13999 | STKc_MAP3K-like | 375 | 621 | 1.09336E-132 | - |
| Pfam | PF00989 | PAS fold | 7 | 114 | 1.9E-15 | IPR013767 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 370 | 621 | 3.8E-68 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 337 | 620 | 4.45E-84 | IPR011009 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 5 | 113 | 2.09E-21 | IPR035965 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 362 | 446 | 9.8E-30 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 16 | 121 | 1.3E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 447 | 649 | 1.3E-64 | - |
| SMART | SM00091 | pas_2 | 6 | 73 | 3.1E-11 | IPR000014 |
| SMART | SM00220 | serkin_6 | 369 | 629 | 5.6E-56 | IPR000719 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 5 | 116 | 4.5E-15 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 369 | 629 | 43.834492 | IPR000719 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 4 | 75 | 19.985958 | IPR000014 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 488 | 500 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 482 | 500 | 6.6E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 529 | 539 | 6.6E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 592 | 614 | 6.6E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 548 | 570 | 6.6E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 443 | 456 | 6.6E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 124 | 145 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 184 | 249 | - | - |
| Coils | Coil | Coil | 614 | 634 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49470.3 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_037439763.1 | dual specificity protein kinase shkD-like [Triticum dicoccoides] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6LHY2 | PAS domain-containing protein tyrosine kinase family protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG015110.