Basic Information
Locus ID:
gene:TRIDC5BG014710
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
zinc-RING finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 120047890 | 120048789 | - | gene:TRIDC5BG014710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.53 | 17,402.62 Da | 57.51 | 71.72 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 85 | 128 | 8.3E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 81 | 135 | 1.48E-19 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 50 | 134 | 6.9E-18 | IPR013083 |
| SMART | SM00184 | ring_2 | 86 | 127 | 1.2E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 86 | 128 | 12.961374 | IPR001841 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G37250.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_051191252.1 | uncharacterized protein LOC127304676 [Lolium perenne] | 0 |
| Q08D68 | E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus tropicalis OX=8364 GN=znrf3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6LHL8 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG014710.