Basic Information
Locus ID:
gene:TRIDC5BG014560
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Carbohydrate-binding protein of the ER
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 118803219 | 118817753 | + | gene:TRIDC5BG014560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.67 | 105,000.69 Da | 46.02 | 88.90 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 625 | 893 | 1.49025E-90 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 621 | 891 | 2.2E-50 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 450 | 507 | 9.2E-12 | IPR001611 |
| Pfam | PF12819 | Malectin-like domain | 43 | 392 | 2.4E-94 | IPR024788 |
| SUPERFAMILY | SSF52058 | L domain-like | 413 | 515 | 2.82E-19 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 603 | 891 | 2.97E-75 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 406 | 526 | 2.0E-26 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 593 | 694 | 2.5E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 695 | 909 | 3.4E-59 | - |
| SMART | SM00220 | serkin_6 | 619 | 895 | 1.9E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 619 | 895 | 37.573132 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 472 | 494 | 7.095899 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 625 | 647 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 741 | 753 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 494 | 507 | 7.2E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 473 | 486 | 7.2E-6 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G29990.1 | Leucine-rich repeat transmembrane protein kinase protein. | 0 |
| RefSeq | XP_037439723.1 | probable LRR receptor-like serine/threonine-protein kinase At1g05700 [Triticum dicoccoides] | 0 |
| O65924 | Putative leucine-rich repeat receptor-like protein kinase At2g19210 OS=Arabidopsis thaliana OX=3702 GN=At2g19210 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6LFW2 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG014560.