Basic Information
Locus ID:
gene:TRIDC5BG013970
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 111787378 | 111789762 | + | gene:TRIDC5BG013970 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.53 | 74,508.95 Da | 38.38 | 90.86 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 22 | 265 | 5.1226E-97 | IPR001220 |
| CDD | cd14066 | STKc_IRAK | 354 | 622 | 1.10593E-85 | - |
| Pfam | PF00139 | Legume lectin domain | 21 | 276 | 6.3E-71 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 349 | 559 | 5.8E-41 | IPR000719 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 19 | 283 | 1.68E-68 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 329 | 643 | 6.01E-76 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 426 | 628 | 2.4E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 334 | 425 | 2.9E-29 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 19 | 263 | 1.2E-67 | - |
| SMART | SM00220 | serkin_6 | 348 | 621 | 1.5E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 348 | 621 | 35.283424 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 472 | 484 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 354 | 378 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G55550.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_037439687.1 | L-type lectin-domain containing receptor kinase S.4-like [Triticum dicoccoides] | 0 |
| Q9M2S4 | L-type lectin-domain containing receptor kinase S.4 OS=Arabidopsis thaliana OX=3702 GN=LECRKS4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6LHP9 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG013970.