Basic Information
Locus ID:
gene:TRIDC5BG013230
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 106648699 | 106652019 | - | gene:TRIDC5BG013230 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.81 | 55,797.80 Da | 45.76 | 99.49 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 10 | 47 | 1.8E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 8 | 50 | 2.22E-10 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 156 | 358 | 3.66E-9 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 7 | 50 | 1.7E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 132 | 366 | 3.5E-8 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 7 | 54 | 10.610234 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80960.5 | - | 0 |
| RefSeq | XP_037439631.1 | uncharacterized protein LOC119307670 [Triticum dicoccoides] | 0 |
| Q9SAG4 | F-box protein At1g80960 OS=Arabidopsis thaliana OX=3702 GN=At1g80960 PE=2 SV=3 | 0 | |
| TrEMBL | A0A3B6LHK0 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG013230.