Basic Information
Locus ID:
gene:TRIDC5BG013110
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 104915023 | 104918514 | + | gene:TRIDC5BG013110 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.61 | 113,602.29 Da | 34.90 | 104.22 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 130 | 189 | 3.9E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 739 | 973 | 4.8E-38 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 450 | 471 | 0.11 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 571 | 630 | 4.9E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 51 | 99 | 8.0E-6 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 715 | 1029 | 6.56E-66 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 89 | 399 | 3.91E-52 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 402 | 658 | 5.1E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 349 | 675 | 8.4E-87 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 818 | 1044 | 7.3E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 717 | 817 | 7.1E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 50 | 345 | 2.3E-75 | IPR032675 |
| SMART | SM00220 | serkin_6 | 734 | 1005 | 1.5E-19 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 375 | 398 | 320.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 593 | 619 | 96.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 224 | 248 | 20.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 128 | 152 | 4.6 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 448 | 472 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 496 | 520 | 25.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 545 | 569 | 80.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 734 | 1045 | 35.509567 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 869 | 881 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 740 | 765 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 499 | 512 | 5.8E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 593 | 606 | 5.8E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47580.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_037439623.1 | probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X1 [Triticum dicoccoides] | 0 |
| C0LGP4 | Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana OX=3702 GN=At3g47570 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6TQA7 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG013110.